PHANOTATE
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Include Aragorn for tRNA masking in addition to tRNAscan-SE
Hi, I recently annotated phages with phanotate in an environment where tRNAscan-SE was installed. Therefore, tRNA masking did use tRNAscan-SE. However, in my final NCBI submission I also added tRNA predictions from Aragorn and apparently had a couple of tRNAs overlapping a CDS. Could you please facilitate Aragorn for tRNA masking as well on systems where it is installed? For now, going to drop the CDS manually. Thank you, Ilya.