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Published 20 hours ago • verified publisher icon delt0r

Time sampled data

Open lormond opened this issue 11 years ago • 2 comments

With recombination, time sampled runs using the -IT switch with t3 of 0.1 give the following error report: Exception in thread "main" java.lang.RuntimeException: ARG ran past the time bound of 1e5*N generations! Check that there is not complete isolation:2.147483647E14 2.1474838180373303E14.

Many thanks.

lormond avatar Jun 04 '13 10:06 lormond

The command line I used is: msms 60 10000 -N 10000 -t 48 -r 48 100 -I 1 60 -SI 0.05 1 0.00001 -SFC -Sc 0 1 2000 2000 0 -IT 3 1 0 20 0.02 20 0.03 20 -b -stat 1 -TjD -stat 2 -TjD -stat 3 -TjD

lormond avatar Jun 05 '13 11:06 lormond

Currently serial samples and recombination does not work. The fix will be forthcoming with the refactor

delt0r avatar Jun 10 '13 14:06 delt0r