Add Tutorial for Analyzing MD Trajectories Using Deeptime

[JilsyXavier]

This pull request adds a Jupyter Notebook tutorial (md_trajectory_tutorial.ipynb) demonstrating how to analyze molecular dynamics (MD) trajectories using Deeptime library. The tutorial covers loading trajectories, performing Time-lagged Independent Component Analysis (TICA), and visualizing results. Changes Made

• Added md_trajectory_tutorial.ipynb with detailed instructions and code examples.
• Included explanations and comments throughout the notebook for clarity. Purpose The purpose of this pull request is to provide a comprehensive guide for users interested in leveraging Deeptime for MD trajectory analysis. This tutorial enhances the repository's documentation and educational resources.

Checklist

• Verified functionality of code examples.
• Checked formatting and readability of the tutorial.

Author : Jilsy Xavier [email protected]