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Why do we have the protein reordering

Open dagap opened this issue 3 years ago • 0 comments

In your dataloader, you have the following lines:

self.alphabet = "ACDEFGHIKLMNPQRSTVWY"
self.reorder_alphabet = "DEKRHNQSTPGAVILMCFYW"

Could you please comment on this alphabet reordering? I guess the ordering orders them by some properties of the amino acids but I am not sure what purpose it is serving in the code.

dagap avatar Nov 22 '21 15:11 dagap