dcomtois
Installing in Azure Synapse + SparkR: Error "fatal error: Magick++.h: No such file or directory compilation terminated."
start install.packages pkgs=summarytools time:2023-02-24 09:20:52 Installing package into ‘/nfs4/R/user-lib/application_1677225147371_0001’ (as ‘lib’ is unspecified) also installing the dependency ‘magick’
trying URL 'https://cloud.r-project.org/src/contrib/magick_2.7.3.tar.gz' Content type 'application/x-gzip' length 4813163 bytes (4.6 MB)
downloaded 4.6 MB
trying URL 'https://cloud.r-project.org/src/contrib/summarytools_1.0.1.tar.gz' Content type 'application/x-gzip' length 1263885 bytes (1.2 MB)
downloaded 1.2 MB
Loading required package: usethis
- installing source package ‘magick’ ... ** package ‘magick’ successfully unpacked and MD5 sums checked ** using staged installation Package Magick++ was not found in the pkg-config search path. Perhaps you should add the directory containing `Magick++.pc' to the PKG_CONFIG_PATH environment variable No package 'Magick++' found Using PKG_CFLAGS= Using PKG_LIBS=-lMagick++-6.Q16 --------------------------- [ANTICONF] -------------------------------- Configuration failed to find the Magick++ library. Try installing:
- deb: libmagick++-dev (Debian, Ubuntu)
- rpm: ImageMagick-c++-devel (Fedora, CentOS, RHEL)
- csw: imagemagick_dev (Solaris)
- brew imagemagick@6 (MacOS)
For Ubuntu versions Trusty (14.04) and Xenial (16.04) use our PPA:
sudo add-apt-repository -y ppa:cran/imagemagick
sudo apt-get update
sudo apt-get install -y libmagick++-dev
If Magick++ is already installed, check that 'pkg-config' is in your
PATH and PKG_CONFIG_PATH contains a Magick++.pc file. If pkg-config
is unavailable you can set INCLUDE_DIR and LIB_DIR manually via:
R CMD INSTALL --configure-vars='INCLUDE_DIR=... LIB_DIR=...'
-------------------------- [ERROR MESSAGE] ---------------------------
:1:10: fatal error: Magick++.h: No such file or directory compilation terminated.
ERROR: configuration failed for package ‘magick’
- removing ‘/nfs4/R/user-lib/application_1677225147371_0001/magick’ Loading required package: usethis ERROR: dependency ‘magick’ is not available for package ‘summarytools’
- removing ‘/nfs4/R/user-lib/application_1677225147371_0001/summarytools’
The downloaded source packages are in ‘/tmp/RtmpGV1cQ6/downloaded_packages’ [notebook] install.packages pkgs=summarytools cost [5s] time:2023-02-24 09:20:57 [1] "Error in library(summarytools): there is no package called ‘summarytools’\n----LIVY_END_OF_ERROR----" Warning messages: 1: In func(...) : installation of package ‘magick’ had non-zero exit status 2: In func(...) : installation of package ‘summarytools’ had non-zero exit status
"Error in loadNamespace(x): there is no package called ‘summarytools’"
Not sure if this has been resolved... If not, a solution to make it Azure-compatible (if there is no way to allow Magick, that is), would be to have an alternate version of summarytools which doesn't require Magick -- which is not absolutely necessary; it's just that without it, there is a little bit of blur created when resizing graphs.
Further development is not on the radar on my end, at least for a while, but if anyone wants to have a go at it, help is always welcome.
