proseg icon indicating copy to clipboard operation
proseg copied to clipboard

About spurious coexpression metric for CosMx data

Open yihming opened this issue 8 months ago • 2 comments

Hello,

Thanks for developing this great tool!

When reading through your paper, in Figure 9, I see that you used the degree of spurious coexpression as one of the metrics to measure the segmentation quality of different methods, which was discussed in details in Section 3.2.3.

I just wonder if it is possible to share your implementation on this metric (or maybe I missed it if you had already made it public), so that we could also apply to our CosMx data to compare the methods. Thanks!

Sincerely, Yiming

yihming avatar Jun 26 '24 17:06 yihming