topometry
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PacMAP error
I'm getting an error when trying to run this bit of code in Colab:
import topo as tp
tg = tp.TopOGraph()
tg.run_layouts(emb, n_components=2, bases=['diffusion', 'fuzzy'], graphs=['diff', 'fuzzy'], layouts=['MAP', 'PaCMAP'])
The error is:
TypeError: PaCMAP.__init__() got an unexpected keyword argument 'n_dims'
I can run pacMAP outside of topo just fine so this looks like an easy fix.