topometry icon indicating copy to clipboard operation
topometry copied to clipboard

PacMAP error

Open rxjx opened this issue 1 year ago • 0 comments

I'm getting an error when trying to run this bit of code in Colab:

import topo as tp

tg = tp.TopOGraph()
tg.run_layouts(emb, n_components=2, bases=['diffusion', 'fuzzy'], graphs=['diff', 'fuzzy'], layouts=['MAP', 'PaCMAP'])

The error is: TypeError: PaCMAP.__init__() got an unexpected keyword argument 'n_dims'

I can run pacMAP outside of topo just fine so this looks like an easy fix.

rxjx avatar Sep 22 '22 15:09 rxjx