daviesrob

Fixed by #1535

The "Resource temporarily unavailable" message comes from `errno` getting set to `EAGAIN` or `EWOULDBLOCK`, which indicates that a system call was interrupted. This may be harmless, if the call was...

Did you manage to get any more information on this problem?

Unfortunately there's not much to go on there. It does look like the connection got closed before the "Invalid BGZF header" message was printed, but it's not clear why. It...

Hopefully this was fixed by https://github.com/samtools/htslib/pull/1676. Please add a comment if you're still having problems.

This accidentally reverts the last htscodecs submodule update. Please could you update your local copy with `git submodule update`, and then fix up your bt-1871 branch? I'm not entirely sure,...

Hmm, this is a bit of a rabbit-hole. I don't think it's a good idea to change `reg2bins()`, as it would become non-compliant with the index specification. (BCF defers to...

I've pushed up my progress so far on this: - Reverted the check that was added in `insert_to_l()` as a similar one is already done before calling the function. -...

I didn't think we deleted index files (where they're kept at all)? Which sort of index files are you getting, and are they disappearing, or is the problem that they're...

That looks unfortunate. We'll investigate and see if we can make these requests less open-ended. It may need a bit of rework to how our http requests work though so...