Some problem about running 'getgraphs.py'

[Wangel515]

Hi @davidhin , Thank you for sharing your code! I was trying to reproduce your work and strictly follow the commands in README.md, but the following error occurred while executing singularity exec main.sif python sastvd/scripts/getgraphs.py. I guess the problem may be caused by some parameters error? I don't known how to solve it. Hope to reply and appreciate your help!

[lc338310659]

I have the same problem ,too

[Wangel515]

@lc338310659 hello，请问你解决了吗？

[xixihahaAnZai]

能问一下 ，问题解决了吗

[wyabo]

I have the same problem ,too

[wwptrdo]

12 NUM_JOBS = 1 13 #NUM_JOBS = 100 14 #JOB_ARRAY_NUMBER = 0 if "ipykernel" in sys.argv[0] else int(sys.argv[1]) - 1 15 JOB_ARRAY_NUMBER = 0 hello，I set the NUM_JOB=1 JOB_ARRAY_NUMBER=0 in the file "linevd/sastvd/scripts/getgraphs.py"，this script can run sucessful.

[Book-can]

12 NUM_JOBS = 1 13 #NUM_JOBS = 100 14 #JOB_ARRAY_NUMBER = 0 if "ipykernel" in sys.argv[0] else int(sys.argv[1]) - 1 15 JOB_ARRAY_NUMBER = 0 hello，I set the NUM_JOB=1 JOB_ARRAY_NUMBER=0 in the file "linevd/sastvd/scripts/getgraphs.py"，this script can run sucessful.

this works for me. I guess the NUM_JOBS is a parameter for speed up, which means 100 def preprocess(row) run simultaneously. Thus, JOB_ARRAY_NUMBER should be specified when run the script.] to let every subprocess get its part of the df.