Error in differential_splicing(counts, numeric_x, confounders = confounders, : unused arguments (init = opt$init, seed = opt$seed).

[geng-lee]

Error in differential_splicing(counts, numeric_x, confounders = confounders, : unused arguments (init = opt$init, seed = opt$seed). How to solve this problem?

• scripts: /leafcutter/scripts/leafcutter_ds.R

Running differential splicing analysis...
Error in differential_splicing(counts, numeric_x, confounders = confounders,  : 
  unused arguments (init = opt$init, seed = opt$seed)
Execution halted

[vinayakvsv]

Hello. I am also encountering the same issue when running leafcutter_ds.R. Please advise on what might be the probable cause of the issue. Thanks.

[jackhump]

Hi both, we think this is due to the stan installation.

see #87 for latest installation instructions