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Novel Coronavirus 2019

Open nirabpudasaini opened this issue 4 years ago • 7 comments

The new strain of Coronovirus has had a worldwide effect. It has effected people from different countries. It would be great, for example, to have a tidy time series data tracking the number of people effected by the virus, how many deaths has the virus caused and the number of reported people who have recovered.

HackMD for effort: https://hackmd.io/7x7ScfRTTJ6bx55qH0dxXA?both

Tasks

  • [x] Create a collections page DONE 25 March https://datahub.io/collections/coronavirus
  • [x] Tidy dataset of cases, deaths etc (based on john hopkins data) - DONE 7 March https://github.com/datasets/covid-19
    • [ ] "Meta" dataset of other datasets out there e.g. believe there is one for france
    • [ ] "Meta" dataset of authoritative sources of data ...
  • [ ] Dataset tracking confinements etc
  • [ ] Dataset of ...

Collections page

DONE: see https://datahub.io/collections/coronavirus/

  • [x] Draft some initial content
  • [x] Boot the page in this repo
    • [x] Find an icon to use
    • [x] page url coronavirus
    • [x] add the content
      • [x] include link to datahub datasets
    • [x] submit the pull request

Research

  • Peter Corless has a very informative blog on coronavirus data.
  • The most clean and useful data he links to in the blog is from Johns Hopkins CSSE
    • The data is compiled from various sources and updated daily in a github repo.
    • There is also a map visualization published using the data.
    • The terms of use however states that the data " is provided to the public strictly for educational and academic research purposes".
    • For some reason they are adding each new observation into a column of the csv instead of the row.

nirabpudasaini avatar Feb 18 '20 15:02 nirabpudasaini

@nirabpudasaini did you do the wrangling here and push this to datahub.io? If so please update here ...

rufuspollock avatar Mar 05 '20 17:03 rufuspollock

@rufuspollock would be a good solution https://github.com/EmmanuelAmodu/COVID-19-Datapackage.git. package url https://datahub.io/emmanuelamodu/covid-datapackage/v/4

EmmanuelAmodu avatar Mar 05 '20 21:03 EmmanuelAmodu

@rufuspollock I have not worked on this yet. I can work on it this weekend and push.

nirabpudasaini avatar Mar 06 '20 08:03 nirabpudasaini

@zelima @mpolidori can you update on status here now 😄 Dataset is packaged here I believe https://github.com/datasets/covid-19

rufuspollock avatar Mar 08 '20 10:03 rufuspollock

This is code for philly working with Penn Medicine: https://penn-chime.phl.io/

And an "epidemic calculator" tool: http://gabgoh.github.io/COVID/

starsinmypockets avatar Mar 22 '20 17:03 starsinmypockets

Have created a basic collections page https://datahub.io/collections/coronavirus

rufuspollock avatar Mar 25 '20 12:03 rufuspollock

@starsinmypockets could you do a PR on https://github.com/datasets/awesome-data/blob/master/coronavirus.md to add any relevant datasets, modelling etc 😄

rufuspollock avatar Apr 09 '20 09:04 rufuspollock