dalliance icon indicating copy to clipboard operation
dalliance copied to clipboard

Interactive web-based genome browser.

Results 68 dalliance issues
Sort by recently updated
recently updated
newest added

Hi Can biodalliance generate sashimi plots as igv does? If not is there any plan to support them? Thank you in advance Foivos

Is there away or would it be possible to provide a mechanism whereby a user could highlight a range on the browser then export features found within that range on...

This pull request modifies memstore to accept pre-parsed bed, wig, vcf data provided they validate against a corresponding schema. This resolves #174 but also includes other things that I have...

There are many cram formatted files in the track hub registry (e.g., http://trackhubregistry.org/search/view_trackhub/AVrIY24vpL2YcDCmVC0g) I don't know anything about the cram format, so I'm hoping you have plans to support this...

We are using Biodalliance genome browser with high-coverage bam-files (up to 10,000 reads per base pair). By default, the limit of reads to be displayed is set to 100. (And...

Both for config, and for providing more information about the track. Possibly want two ways of doing this: a generic way to insert some custom DOM in the track editor,...

Currently we're rather over-eager to fetch reference sequence. Conversely, it's relatively easy to get false negatives (e.g. bug fixed today relating to configs with overlays).

I am using this stylesheet to display bed tracks : https://www.biodalliance.org/stylesheets/gencode.xml The rows in the bed tracks have colors that are not honored by the browser, I suspect that the...

I have no idea why all isoforms of a gene are appearing twice (see attached pic). While on biodalliance.org it is correct. I cloned the latest version of Dalliance. Any...

Biodalliance (v0.13) will not display the data in a multiWig track. The track will appear on the browser, but the data will not be displayed. There is no error suggesting...