Dan Li

I am using the data in the "examples" https://github.com/dpeerlab/PhenoGraph/tree/master/examples/data/filtered_gene_bc_matrices/hg19

It seems this problem only happens on Ubuntu (Windows Subsystem for Linux), I run the same tutorial "tutorial_pbmc3k.ipynb" on Windows 10, it can run through successfully.  

Yes, this tutorial https://github.com/dpeerlab/PhenoGraph/blob/master/examples/example-using-random-data-points.ipynb can run through successfully on both Windows 10 and Ubuntu (WSL). Thanks

For tutorial "tutorial_pbmc3k.ipynb" on Ubuntu(WSL): 

Great. Thanks a lot.

> Hi: Thanks for the nice package! When I run the code in chapter 1: > > ``` > set.seed(999) > n = 1000 > df = data.frame(sectors = sample(letters[1:8],...

When I run the tutorial https://snystrom.github.io/memes-manual/articles/integrative_analysis.html I found this error again: ```r head(by_binding) ``` ```r BStringSetList of length 3 [["ectopic"]] chr3L:40482-40581=GGACTGGGGTTGGGTACGAAACGAAATGGAAACATAGCCAAACAC... [["entopic"]] chr3L:60616-60715=CAGGTGCATCCCGCGACGAGTATTTTTTATATTATTGTTTGGCCG... [["orphan"]] chr3L:57749-57848=GAAACCTATACCCCGCCGTCGGCCGATTATCACCTTTTCAAGTCTC... ``` ```r ame_by_binding % runAme...

@ewowiredu That solves the problem. Thanks a lot!

@rcorces Thanks a lot for helping, can you please let me know which Seurat and Matrix versions should I use?

@rcorces I solved this problem by changing the version of `Seurat` package: ```{r} remove.packages("SeuratObject") packageurl