plantcv
plantcv copied to clipboard
danforthcenter
Plant phenotyping with image analysis
**Describe the bug** Running `pcv.watershed_segmentation` ought to return an output image that might be useful for downstream analysis. Currently, the function returns this visually helpful (but analytically weird) `joined` image...
**Describe your changes** Adding a simple RGB workflow to the tutorial gallery. This tutorial is a straight-forward computer vision workflow and contains references to other workflows with options for more...
**Describe your changes** A new function that filters objects based on their solidity. **Type of update** Is this a: * New feature * Work in progress **Associated issues** Merge after...
**Is your feature request related to a problem? Please describe.** There are some applications where the goal is to remove large objects and small objects, and only keep the middle-sized...
**Describe the bug** A bug was found in some applications of `roi_type="largest"` within the `pcv.roi.filter` function recently, uncovered by @sdkenney42 . Instead of returning the largest object in the mask...
**Describe your changes** Added a tutorial for the checkerboard calibration and camera calibration functions. **Type of update** Is this a: * Update to documentation **Associated issues** Reference associated issue numbers....
For context please see... **Associated issues** - #1481 **For the reviewer** See [this page](https://plantcv.readthedocs.io/en/latest/pr_review_process/) for instructions on how to review the pull request. - [ ] PR functionality reviewed in...
Hello Everyone, Is there any way of doing multi ROI plot with a customized ROI option? Thanks
Removed default mutable args and reduced complexity of update_color_dict Includes fixes for -Unnecessary comprehension (PTC-W0016) -Dangerous default argument (PYL-W0102)
**Is your feature request related to a problem? Please describe.** In the case of `pcv.io.read_dataset` the argument is named `source_path`, but in the case of `pcv.transform.checkerboard_calib` the argument is named...