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Update `pcv.segment_image_series` and tutorial

Open HaleySchuhl opened this issue 7 months ago • 0 comments

Is your feature request related to a problem? Please describe. We have a temporary workaround for now, but we ought to update pcv.semgent_image_series to handle the v4 syntax of multi-object ROIs (e.g. Objects class).

Describe the solution you'd like

  • [ ] Update pcv.semgent_image_series to accept the output from pcv.roi.multi in the roi input parameter
  • [ ] Update the documentation so that it's clear this can be used on one time series at a time
  • [ ] Update the tutorial here based on the new syntax
  • [ ] And finally, add the updated tutorial to the PlantCV gallery of tutorials (add all the buttons, and add a link to the tutorial from the function documentation page.

Describe alternatives you've considered Document the workaround.

Additional context https://github.com/danforthcenter/plantcv/issues/1568

HaleySchuhl avatar Jul 22 '24 20:07 HaleySchuhl