can't convert 4'-Vinyluridine-5'-(O-phenyl-N-(S)-1-(isopropoxycarbonyl)ethyl phosphoramidate)

Open dan2097 opened this issue 5 years ago • 1 comments

can not convert 4'-Vinyluridine-5'-(O-phenyl-N-(S)-1-(isopropoxycarbonyl)ethyl phosphoramidate) but chemdraw can does this transform

Mar 02 '20 07:03 dan2097

Original comment by Daniel Lowe (Bitbucket: dan2097, GitHub: dan2097).

Thanks, there are two area of this name that OPSIN currently doesn’t handle correctly, the N-(S)-1-(isopropoxycarbonyl)ethyl is not being interpreted as N-((S)-1-(isopropoxycarbonyl)ethyl), and the O-phenyl fails as it is interpreted as a substitution of a negatively charged oxygen, rather than like in ester formation. I’m not sure when I’ll get around to addressing this.

BTW am I right in saying that ChemDraw interprets O-phenylacetate the same as O-phenylacetic acid? (OPSIN currently rejects the first name)

Mar 15 '20 17:03 dan2097