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Oh dear, this appears to be a bug in the execution of a Rubra command - Bernie, one of the coauthors of RedDog, is also the main collaborator of Rubra...

How are you editing the config file? - can you send me a copy to davide at unimelb dot edu dot au ?

Hi Rachel, I did notice a couple of things with the config file you are using - The config files are both for version 1b5, but you are now running...

Hi MostafaYA, You don't say what system you are running on - reddog is designed to run on a distributed system, where lots of jobs are sent out. And yes,...

Good news is I don't think it's your Genbank reference that is the problem... Can you check if the file really does not exist? (i.e. ...RedDog_output/temp/WT-200/WT-200_cns.fq) One of the jobs...

Add a '--style print' to your reddog command - this will print out all the jobs for each step in the pipeline, including those that have completed and those that...

Yes - try doubling it...

This is a collision error of temp files during piped commands in a batch script. Whilst this is not directly a RedDog issue (the problem is o/s related i.e. how...