phantasus
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Bug when changing size of volcano plot points
When I am changing size of the points in volcano plot they seem to be plotted with wrong coordinates if p-value
is > 0
Steps to repropduce:
- Open dataset, perform lima
- Select several genes. add annotation which will represent points size (
Edit/Annotate Selected rows
). I used value 1 - Invert selection and annotate other genes with different size. (I used 0.1)
- Open original volcano plot (
Tools/Plots/Volcano
) - Specify size of the points to be read from the IFN field
- Result plot will be looking like this
- However after setting P value significance to 0 the positions of colored points are changed
- Positions with value 0 seems to be more accurate according to label by selected check mark