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GSEA plot badly handles empty values

Open assaron opened this issue 5 years ago • 0 comments

  1. Open a dataset with a row of zeroes.
  2. Do a marker selection/signal to noise ratio. Some of the genes will have empty values (because of division by zero).
  3. Select some genes and do GSEA plot.

GSEA plot fails because fgsea can't handle NAs in stats vector

assaron avatar Feb 13 '20 20:02 assaron