Charles Tapley Hoyt

Results 821 comments of Charles Tapley Hoyt

It would be really great to have a y0 DSL to causaleffect converter, then we could create objects to pass directly to the causaleffect simplify implementation as an oracle for...

What happens after #29 is done? Is there a "fasification" algorithm built on top of it? Can we describe the input/output the same way as in the other issues?

Turns out we don't need to do LV-LV contraction if you apply Evans rule 2 iteratively with a topological sort order Example: ``` A -> B* -> C* -> D...

So for the Q construct, do we need to introduce a new kind of DSL element, or would it be enough to just have another named tuple representing the contents...

I really like this idea since it means that the regular publication and preprint can be managed in the same template I would go even further and say that this...

FYI, pandoc 3.5 now claims to support multi-architecture builds for the `pandoc/core` image, but not yet for `pandoc/latex` image

I did something similar in the Bioregistry - https://bioregistry.io/collection/0000011. This might be useful as a starting point for you

This has been addressed with the addition of https://bioregistry.io/registry/uniprot.core. If you want to pick up some of the other discussion, please open a new issue

@cmungall in https://github.com/biopragmatics/pyobo/pull/362 I added an explicit annotation saying where the ontology came from. Do you want to open a different issue to track the differences between expasy and enzyme-database.org,...