Charles Tapley Hoyt

Results 421 comments of Charles Tapley Hoyt

Live endpoint is now available at https://bioregistry.io/api/external/mapping/obofoundry/bioportal. See also https://bioregistry.io/api/metaregistry/obofoundry/FBbt which makes it possible to query bioregistry records based on external registries' prefixes. You can get the mappings directly out...

Hmm now that I'm double checking, the Bioregistry is storing the "id" field from OBO Foundry and not the preferred prefix. Awfully hard to keep these straight since it's not...

@matentzn this is Mauno Vihinen, the current responsible person (see discussion at https://github.com/OBOFoundry/OBOFoundry.github.io/issues/886#issuecomment-1088761656) @maunov to un-orphan this ontology, we would also need the following information from you: - license information...

@maunov CC BY 4.0? or 3.0? Ideally the newer license. Would be great to incorporate this information on your website and also in the ontology itself.

@beckyjackson I am very happy you have been able to work on this - from a user perspective this will solve many of my debugging problems. Thank you :)

Alternate solution to making a programmatic solution: require _all_ ontologies are annotated with a domain, do the annotation, and add a unit test.

All ontologies are required to have domains as of #2115, so this can be closed.

See https://cthoyt.com/obo-community-health/contacts for another way of summarizing the contacts (though not adequate for actually all of the people who are in the community). It would be possible to auto-generate something...

Hi @erik-whiting thanks for giving this a try. I didn't respond earlier because I'm not really sure what I think about this. For sure this is hacky and that makes...

the following ontologies in "anatomy and development" and "phenotype" domains do not have root terms annotated. See https://cthoyt.github.io/cob-root-analysis for images of the upper parts of all of these ontologies to...