Grouch

Results 6 issues of Grouch

Getting following error message trying to lock file before a citation is displayed. We are working on a lustre fs, which i assume is the problem. ```galaxy.managers.citations ERROR 2018-05-16 15:04:19,348...

Data sources crucial to clinicians in characterizing and prioritizing variants can be found via Oncotator. It would be immensely valuable to pull from this wealth of knowledge in a compliant...

enhancement
Variant Annotation
repo manager

Is it possible to share histories with other users using Bioblend? If not, are there suggestions for good ways to do this?

enhancement
paper-cut

Include specification of subworkflow steps in PARAM_DICT. Placing here in case people are curious: {STEP_ID: {SUBWORKFLOW_STEP_ID|PARAM_NAME: VALUE, ...}}

Searching with "rs397862468" brings up "http://exac.broadinstitute.org/variant/1-103356082-A-C" instead of http://exac.broadinstitute.org/variant/1-103356072-CA-C as expected.

I'm using bioblend to import datasets to Galaxy histories for processing batches of clinical sequencing data. We are currently looking at processing some of our data through Illumina DRAGEN hardware,...

kind/enhancement
feature-request
area/datatype-framework
area/tool-framework
area/upload
area/backend