M3C
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crj32
Monte Carlo Reference-based Consensus Clustering
I struggled understanding that 30 clusters was too much to be plotted with the default colors. I suggest to add an error log pointing out that more colors needs to...
https://github.com/crj32/M3C/blob/8d975f2763a4fdfb01774c221cbcb0d52c28f5c7/R/M3C.R#L115 In this line the 'X' is removed from the column names. If the following character is a number, then the 'X' will be added again when the matrix is...
Hello, In figure 6 of your paper you demonstrate that M3C can generate a dendrogram to show hierarchical structure. I've found a previous M3C manual (1.41, April 2019) that shows...
Hi!! I was developing a package wherein I needed to write a function for dimensionality reduction of a matrix and visualize the plots and M3C turns out to be the...
Thanks for a very useful package! How do I change distance measure from Euclidian to spearman or Pearson? And how do I set linkage method (Average, Ward-D2)?
Originally posted as a [stackoverflow question](https://stackoverflow.com/questions/60896731/r-m3c-library-duplicate-row-names-error-message) Whilst attempting to run consensus clustering using M3C, I get an error - my console output (actual row names changed for example code): ```...
Could you help me to take a look at this error? Thanks a lot! **environment:** R 3.6 with the latest version in the docker images: https://hub.docker.com/r/bioconductor/bioconductor_docker **Data:** 1000 row *...
