Error while installing numpy from scipy tutorial

[justinvf-zz]

Bentomaker: Error: bentomaker crashed (uncaught exception <type 'exceptions.IOError'>: [Errno 2] No such file or directory: 'build/numpy/core/include/numpy/_numpyconfi
g.h').

This occurred during setup in the "Diving into Numpy" tutorial. It was using the virtualbox provided in the tutorial so this should hopefully be reproducible. It seems like it might be an issue when not using virtual env.

History

All bad typos included 1 sudo apt-get update 2 sudo apt-get remove --purge abiword thunderbird* 3 sudo apt-get remove --purge gnumeric* pidgin* 4 df 5 df -h 6 sudo apt-get remove --purge gimp* 7 df -h 8 ls /lib/modules/ 9 uname -a 10 sudo reboot 11 df -h 12 sudo apt-get clean 13 df -h 14 uname -a 15 sudo apt-get remove linux-image-3.8.0-19-generic 16 df -h 17 sudo apt-get remove linux-headers-3.8.0-19* 18 df -h 19 ls 20 exit 21 dd if=/dev/zero of=/EMPTY bs=1M 22 sudo dd if=/dev/zero of=/EMPTY bs=1M 23 sudo rm /E 24 sudo rm /EMPTY 25 df -h 26 wget 27 ls 28 sudo apt-get install openssh 29 sudo apt-get install openssh-server 30 ifconfig 31 ssh localhost 32 exit 33 df 34 df -h 35 exit 36 mkdir /home/vagrant/.ssh 37 chmod 700 /home/vagrant/.ssh 38 cd /home/vagrant/.ssh 39 wget --no-check-certificate 'https://raw.github.com/mitchellh/vagrant/master/keys/vagrant.pub' -O authorized_keys 40 chmod 600 /home/vagrant/.ssh/authorized_keys 41 chown -R vagrant /home/vagrant/.ssh 42 ls 43 exit 44 ifconfig 45 ls 46 vim postinstall.sh 47 vi postinstall.sh 48 exit 49 ls 50 vim postinstall.sh 51 vi postinstall.sh 52 vim .vbox_version 53 vi .vbox_version 54 ls 55 sudo bash postinstall.sh 56 ls 57 df 58 df -h 59 ls 60 vim postinstall.sh 61 exit 62 df -h 63 df 64 exit

# WHERE I LOGGED IN

65 ls 66 ls /vagrant 67 pwd 68 ls 69 cd src/ 70 ls 71 cd numpy-git/ 72 ls

BUILD numpy from dist utils

73 python setup.py build_ext -i 74 nosetests numpy/core 75 pip install python-nose 76 pip install nosetest 77 pip install nosetests 78 cd ../bento-git/ 79 ls 80 cd ../numpy-git/ 81 echo $WAFDIR 82 ls /src/waf-git 83 ls ~/src/waf-git/ 84 cd ../bento-git/ 85 python setup.py install 86 sudo python setup.py install 87 cd ../waf-git/ 88 xport WAFDIR=~/src/waf-git 89 export WAFDIR=~/src/waf-git 90 cd ../numpy-git/

TRIED TO RUN, complained about not finding bento

91 bentomaker build -i

bento was not visible on path...

92 python 93 cd ../bento-git/ 94 lg 95 ls 96 sudo python setup.py install 97 python 98 cd .. 99 python 100 echo $PYTHONPATH

# Hack to get around bento not being visible

101 export PYTHONPATH=~/src/bento-git 102 pwd 103 python 104 cd numpy-git/ 105 ls 106 bentomaker build -i 107 ls 108 echo $WAFDIR 109 ls /home/vagrant/src/waf-git 110 bentomaker build -i 111 ls build/numpy/core/include/numpy/ 112 echo $PYTHON_PATH 113 echo $PYTHONPATH 114 cd ../bento-git/ 115 sudo python setup.py install 116 cd ..

Where you came over and fixed things

117 python 118 exit() 119 PYTHONPATH= python 120 ls 121 virtualenv numpy-venv 122 source numpy-venv/bin/activate 123 cd bento-git/ 124 python setup.py install 125 cd .. 126 bentomaker 127 which bentomaker 128 cd numpy-git/ 129 echo $WAFDIR 130 bentomaker build -i 131 git st 132 git status 133 git clean -fdx numpy/ build/ 134 bentomaker build -i 135 history > ~/install_steps.txt