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ClusterView/clust_info.tsv columns disappear during curation

Open boydmeredith opened this issue 5 years ago • 3 comments

Sometimes as I am curating a session, I find that the amplitude, contamPct, and KSLabel columns of the ClusterView go blank and their corresponding entries in clust_info.tsv go away too. Is there a way to avoid this or have it refresh? I want to use the clust_info.tsv file downstream and it is strange to have to go hand edit it.

Thanks!

boydmeredith avatar Nov 11 '20 21:11 boydmeredith

I have the same issue, has anyone got a solution? I opened the .tsv file and the values have disappeared, any idea why they get deleted? image

lkatsouri avatar Nov 27 '20 10:11 lkatsouri

I had the same in one of my sessions. Any update?

MMMariel avatar Jun 08 '21 05:06 MMMariel

Same experience here.

I suspect this occurs because those columns comprise values that are only computed within Kilosort, and don't get recomputed when clusters are merged in Phy.

Instances where they appear to be maintained after manual curation are only those where a single cluster was split, and the old —but not necessarily valid—values have been inherited from the original cluster.

czuba avatar Jun 15 '21 18:06 czuba