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Slice point number does not update properly when moving to next slice

Open kouichi-c-nakamura opened this issue 2 years ago • 0 comments

I noticed that when I'm using sliceBrowser and move to the next slice, and I add a few points in the new pair of slices, hitting h on Atlas Viewer results in a wrong number of slice points (points to be used to match histological slices and atlas slices). I receive an error message saying the number of points do not match between Slice Viewer and Atlas Viewer, although they clearly should.

eg. When I added 3 points each for the new slice on Slice Viewer and Atlas Viewer and had 16 points in the previous, I received this error message:

Unable to transform -- 19 slice points and 3 reference points

Apparently, AtlasTransformBrowser.m (around here) fails to update the number of points on the histological slice (ud_slice.pointList) and accumulate the points from the previous slice and ones added in the new slice, thus reporting too many slice points compared to reference points on atlas images.

I can manually delete the slice points by hitting d many times for the moment.

kouichi-c-nakamura avatar Jul 20 '22 15:07 kouichi-c-nakamura