"NameError: name 'shutil' is not defined, line 231 "shutil.copy(classorig, classfile)" in "roi_detect _and_extract(ops)

[vickerse1]

Hello,

I get this error just after suite2p finishes detecting ROIs. I'm running the "run_pipeline_tiffs_or_batch.ipynb" jupyter notebook in jupyter lab.

---

NameError Traceback (most recent call last) in 13 14 # run one experiment ---> 15 opsEnd = run_s2p(ops=ops,db=db)

~/miniconda3/envs/suite2p/lib/python3.7/site-packages/suite2p/run_s2p.py in run_s2p(ops, db) 201 t11=tic() 202 print('----------- ROI DETECTION AND EXTRACTION') --> 203 ops1[ipl] = roiextract.roi_detect_and_extract(ops1[ipl]) 204 ops = ops1[ipl] 205 fpath = ops['save_path']

~/miniconda3/envs/suite2p/lib/python3.7/site-packages/suite2p/roiextract.py in roi_detect_and_extract(ops) 229 "classifiers/classifier.npy" 230 ) --> 231 shutil.copy(classorig, classfile) 232 print('NOTE: applying classifier %s'%classfile) 233 iscell = classifier.run(classfile, stat, keys=['npix_norm', 'compact', 'skew'])

NameError: name 'shutil' is not defined

Do you have an idea what the problem might be?

Thanks,

Evan