[Bug] Images wrongly loaded when size in x and y are different

[albagarrey]

Describe the Bug

I am loading an image with a wado loader. The size in the X axis is different from the size in the Y axis. This is the complete metadata of each dicom:

{'00080005': {'vr': 'CS', 'Value': ['ISO_IR 100']}, '00080008': {'vr': 'CS', 'Value': ['DERIVED', 'SECONDARY', 'MPR']}, '00080016': {'vr': 'UI', 'Value': ['1.2.840.10008.5.1.4.1.1.2']}, '00080018': {'vr': 'UI', 'Value': ['1.3.6.1.4.1.55648.164020421491223780677773683262514360440.204.1']}, '00080020': {'vr': 'DA', 'Value': ['20190313']}, '00080030': {'vr': 'TM'}, '00080032': {'vr': 'TM', 'Value': ['095248']}, '00080050': {'vr': 'SH', 'Value': ['XXX_573942136']}, '00080060': {'vr': 'CS', 'Value': ['CT']}, '00080070': {'vr': 'LO', 'Value': ['Philips']}, '00080080': {'vr': 'LO', 'Value': ['XXX']}, '0008103E': {'vr': 'LO', 'Value': ['HEAD AX MPR']}, '00081040': {'vr': 'LO', 'Value': ['na']}, '00081090': {'vr': 'LO', 'Value': ['iCT 256']}, '00100010': {'vr': 'PN', 'Value': [{'Alphabetic': 'XXX_Patient_2207674320132130077'}]}, '00100020': {'vr': 'LO', 'Value': ['XXX_Patient_2207674320132130077']}, '00100040': {'vr': 'CS', 'Value': ['M']}, '00101010': {'vr': 'AS', 'Value': ['050Y']}, '00180015': {'vr': 'CS', 'Value': ['BRAIN']}, '00180022': {'vr': 'CS', 'Value': ['HELIX']}, '00180050': {'vr': 'DS', 'Value': [2.5]}, '00180060': {'vr': 'DS', 'Value': [120]}, '00180088': {'vr': 'DS', 'Value': [2.5]}, '00180090': {'vr': 'DS', 'Value': [500]}, '00181020': {'vr': 'LO', 'Value': ['4.1']}, '00181030': {'vr': 'LO', 'Value': ['HEAD WITHOUT /Head']}, '00181100': {'vr': 'DS', 'Value': [291]}, '00181110': {'vr': 'DS', 'Value': [1040]}, '00181111': {'vr': 'DS', 'Value': [570]}, '00181120': {'vr': 'DS', 'Value': [0]}, '00181130': {'vr': 'DS', 'Value': [164.3]}, '00181150': {'vr': 'IS', 'Value': [1883]}, '00181151': {'vr': 'IS', 'Value': [239]}, '00181152': {'vr': 'IS', 'Value': [450]}, '00181160': {'vr': 'SH', 'Value': ['UC']}, '00181210': {'vr': 'SH', 'Value': ['UC']}, '00185100': {'vr': 'CS', 'Value': ['HFS']}, '00189306': {'vr': 'FD', 'Value': [0.625]}, '00189307': {'vr': 'FD', 'Value': [80]}, '00189309': {'vr': 'FD', 'Value': [42.5]}, '00189310': {'vr': 'FD', 'Value': [50.944]}, '00189311': {'vr': 'FD', 'Value': [0.398]}, '00189345': {'vr': 'FD', 'Value': [59.60000000000017]}, '0020000D': {'vr': 'UI', 'Value': ['1.3.6.1.4.1.55648.164020421491223780677773683262514360440']}, '0020000E': {'vr': 'UI', 'Value': ['1.3.6.1.4.1.55648.164020421491223780677773683262514360440.204']}, '00200011': {'vr': 'IS', 'Value': [204]}, '00200012': {'vr': 'IS', 'Value': [2]}, '00200013': {'vr': 'IS', 'Value': [1]}, '00200032': {'vr': 'DS', 'Value': [-127.5675, -5.424177, 1064.29580958579]}, '00200037': {'vr': 'DS', 'Value': [0.994968, -0.06814497, -0.07345025, 0.0310074, 0.9065236, -0.4210149]}, '00201040': {'vr': 'LO'}, '00201041': {'vr': 'DS', 'Value': [1009.18]}, '00280002': {'vr': 'US', 'Value': [1]}, '00280004': {'vr': 'CS', 'Value': ['MONOCHROME2']}, '00280010': {'vr': 'US', 'Value': [390]}, '00280011': {'vr': 'US', 'Value': [404]}, '00280030': {'vr': 'DS', 'Value': [0.57004, 0.57004]}, '00280100': {'vr': 'US', 'Value': [16]}, '00280101': {'vr': 'US', 'Value': [12]}, '00280102': {'vr': 'US', 'Value': [11]}, '00280103': {'vr': 'US', 'Value': [0]}, '00281050': {'vr': 'DS', 'Value': [40, 40]}, '00281051': {'vr': 'DS', 'Value': [80, 80]}, '00281052': {'vr': 'DS', 'Value': [-1024]}, '00281053': {'vr': 'DS', 'Value': [1]}, '7FE00010': {'vr': 'OW', 'BulkDataURI': 'XXXX'}}

When Cornerstone displays the image, the same size is used in both axis leading to voxels moving from their correct positions when going through the stack (only the first slice in the stack is seen correctly):

This happens with all the images that have different x and y sizes.

Steps to Reproduce

1. Open an image with size x != size y

The current behavior

Only one slice in the stack is seen correctly

The expected behavior

Adapt the size of each slice to the size stated in the metadata

OS

macOC

Node version

18.17.1

Browser

Chrome

[sedghi]

Could you kindly provide the data if it has been anonymized and you can confirm that there is no patient health information present in any of the headers or embedded within the pixel data?

[albagarrey]

Sure, you can find the complete series here: dicoms. Thanks @sedghi

[albagarrey]

Any updates on this? @sedghi Thanks :)

[albagarrey]

Hello @sedghi. Have you been able to check this?

[sedghi]

If i drag and drop it in OHIF it works fine

also if i use orthanc to upload them and works fine too

so i think it is your server issue and possibly metadata