setup-miniconda
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conda-incubator
Error on activation of environment on Windows Github Workflow
I am not sure if this is the right place to report so please redirect me if this error is better reported elsewhere.
I have a workflow that uses setup-miniconda. On 10/9/2024 the windows jobs in this workflow started producing the error below when any mamba command is run after the setup step (in particular the environment activation & mamba info). The error appeared in this run (previous run that did not exhibit the error can be found here). The commit on which the error first occurred did not modify the workflow or environment.yml files. I could not find a difference in the package versions installed in the environment, the version of conda/mamba, or the runner image. I tried using miniforge (previously I was using mambaforge as I was unaware of the deprecation, but the same error occurs with miniforge) and pinning mamba to 1.5.10. Any help would be greatly appreciated.
Error message
``` # >>>>>>>>>>>>>>>>>>>>>> ERROR REPORTTraceback (most recent call last):
File "C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\exception_handler.py", line 18, in __call__
return func(*args, **kwargs)
^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\cli\main.py", line 98, in main_sourced
context.__init__()
File "C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\base\context.py", line 497, in __init__
self._set_search_path(
File "C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\common\configuration.py", line 1423, in _set_search_path
self._search_path = IndexedSet(self._expand_search_path(search_path, **kwargs))
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\runneradmin\miniconda3\Lib\site-packages\boltons\setutils.py", line 118, in __init__
self.update(other)
File "C:\Users\runneradmin\miniconda3\Lib\site-packages\boltons\setutils.py", line 351, in update
for o in other:
^^^^^
File "C:\Users\runneradmin\miniconda3\Lib\site-packages\conda\common\configuration.py", line 1394, in _expand_search_path
path = Path(template).expanduser()
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\runneradmin\miniconda3\Lib\pathlib.py", line 1406, in expanduser
raise RuntimeError("Could not determine home directory.")
RuntimeError: Could not determine home directory.
$ C:\Users\runneradmin\miniconda3\Scripts\conda-script.py shell.cmd.exe activate base
environment variables:
CIO_TEST=
EdgeDriver;C:\SeleniumWebDrivers\ChromeDriver;C:\Program Files
(x86)\sbt\bin;C:\Program Files (x86)\GitHub CLI;C:\Program
Files\Git\usr\bin;C:\Program Files (x86)\pipx_bin;C:\npm\prefix;C:\hos
tedtoolcache\windows\go\1.21.13\x64\bin;C:\hostedtoolcache\windows\Pyt
hon\3.9.13\x64\Scripts;C:\hostedtoolcache\windows\Python\3.9.13\x64;C:
\hostedtoolcache\windows\Ruby\3.0.7\x64\bin;C:\Program Files\OpenSSL\b
in;C:\tools\kotlinc\bin;C:\hostedtoolcache\windows\Java_Temurin-
Hotspot_jdk\8.0.422-5\x64\bin;C:\Program
Files\ImageMagick-7.1.1-Q16-HDRI;C:\Program Files\Microsoft SDKs\Azure
\CLI2\wbin;C:\ProgramData\kind;C:\ProgramData\Chocolatey\bin;C:\Window
s\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Windows\System32\Win
dowsPowerShell\v1.0;C:\Windows\System32\OpenSSH;C:\Program
Files\dotnet;C:\Program Files\PowerShell\7;C:\Program
Files\Microsoft\Web Platform Installer;C:\Program
Files\TortoiseSVN\bin;C:\Program Files\Microsoft SQL Server\Client
SDK\ODBC\170\Tools\Binn;C:\Program Files\Microsoft SQL
Server\150\Tools\Binn;C:\Program Files (x86)\Windows Kits\10\Windows
Performance Toolkit;C:\Program Files (x86)\WiX Toolset
v3.14\bin;C:\Program Files\Microsoft SQL
Server\130\DTS\Binn;C:\Program Files\Microsoft SQL
Server\140\DTS\Binn;C:\Program Files\Microsoft SQL
Server\150\DTS\Binn;C:\Program Files\Microsoft SQL Server\160\DTS\Binn
;C:\Strawberry\c\bin;C:\Strawberry\perl\site\bin;C:\Strawberry\perl\bi
n;C:\ProgramData\chocolatey\lib\pulumi\tools\Pulumi\bin;C:\Program
Files\CMake\bin;C:\ProgramData\chocolatey\lib\maven\apache-
maven-3.8.7\bin;C:\Program Files\Microsoft Service
Fabric\bin\Fabric\Fabric.Code;C:\Program Files\Microsoft SDKs\Service
Fabric\Tools\ServiceFabricLocalClusterManager;C:\Program
Files\nodejs;C:\Program Files\Git\cmd;C:\Program
Files\Git\mingw64\bin;C:\Program Files\Git\usr\bin;C:\Program
Files\GitHub CLI;C:\tools\php;C:\Program
Files\Amazon\AWSCLIV2;C:\Program
Files\Amazon\SessionManagerPlugin\bin;C:\Program
Files\Amazon\AWSSAMCLI\bin;C:\Program Files\Microsoft SQL
Server\130\Tools\Binn;C:\Program Files\LLVM\bin;C:\Users\runneradmin.
dotnet\tools;C:\Users\runneradmin.cargo\bin;C:\Users\runneradmin\AppD
ata\Local\Microsoft\WindowsApps;C:\Program Files (x86)\Microsoft
Visual Studio\Installer;C:\Program Files\Microsoft Visual
Studio\2022\Enterprise\VC\Tools\Llvm\x64\bin;C:\Program
Files\Microsoft Visual Studio\2022\Enterprise\Common7\IDE\CommonExtens
ions\Microsoft\CMake\CMake\bin;C:\Program Files\Microsoft Visual Studi
o\2022\Enterprise\Common7\IDE\CommonExtensions\Microsoft\CMake\Ninja;C
:\Program Files\Microsoft Visual Studio\2022\Enterprise\Common7\IDE\VC
\Linux\bin\ConnectionManagerExe;C:\Program Files\Microsoft Visual
Studio\2022\Enterprise\VC\vcpkg;C:\Program
Files\Git\usr\bin\vendor_perl;C:\Program Files\Git\usr\bin\core_perl
REQUESTS_CA_BUNDLE=
active environment : None
shell level : 0
user config file : D:\a\ePhotosynthesis_C\ePhotosynthesis_C\~\.condarc
populated config files : conda version : 24.7.1 conda-build version : not installed python version : 3.12.6.final.0 solver : libmamba (default) virtual packages : __archspec=1=x86_64_v3 __conda=24.7.1=0 __win=0=0 base environment : C:\Users\runneradmin\miniconda3 (writable) conda av data dir : C:\Users\runneradmin\miniconda3\etc\conda conda av metadata url : None channel URLs : https://repo.anaconda.com/pkgs/main/win-64 https://repo.anaconda.com/pkgs/main/noarch https://repo.anaconda.com/pkgs/r/win-64 https://repo.anaconda.com/pkgs/r/noarch https://repo.anaconda.com/pkgs/msys2/win-64 https://repo.anaconda.com/pkgs/msys2/noarch package cache : C:\Users\runneradmin\miniconda3\pkgs D:\a\ePhotosynthesis_C\ePhotosynthesis_C~.conda\pkgs C:\Users\runneradmin\AppData\Local\conda\conda\pkgs envs directories : C:\Users\runneradmin\miniconda3\envs D:\a\ePhotosynthesis_C\ePhotosynthesis_C~.conda\envs C:\Users\runneradmin\AppData\Local\conda\conda\envs platform : win-64 user-agent : conda/24.7.1 requests/2.32.3 CPython/3.12.6 Windows/2022Server Windows/10.0.20348 solver/libmamba conda-libmamba-solver/24.7.0 libmambapy/1.5.9 administrator : True netrc file : None offline mode : False
An unexpected error has occurred. Conda has prepared the above report. If you suspect this error is being caused by a malfunctioning plugin, consider using the --no-plugins option to turn off plugins.
Example: conda --no-plugins install
Alternatively, you can set the CONDA_NO_PLUGINS environment variable on the command line to run the command without plugins enabled.
Example: CONDA_NO_PLUGINS=true conda install
No report sent. To permanently opt-out, use
$ conda config --set report_errors false
</details>
