Question about long processing time for specific conditions in DAS analysis

[YIGUIz]

Hi @EduEyras @leipzig ,

I'm currently running DAS across 100 conditions with the following code:

sbatch -p Cnode_all -c 3 --mem=60GB -J SR_fix_transcript_SE_DAS --time=30-00:00:00 --wrap='singularity exec /public/home/b20223040336/Workspace/long_read_rna/02code/singularity_images/suppa:2.3--py36_0 suppa.py diffSplice --method empirical --input cattle_SE_strict.ioe --psi a1_SE.psi a2_SE.psi ... a98_SE.psi a99_SE.psi --tpm a1.tpm a2.tpm ... a99.tpm -pa -gc -c -th 0.1 --nan 0.5 -o SR_fix_transcript_SE_DAS'

The program seems to be stuck on processing a98_SE and a99_SE for quite a long time. Could you confirm if this is normal behavior, or if there might be an issue?