missing lib.tools

[theokirkland]

I am trying to run SUPPA on a mac. I have the program installed with conda. When I run the following command

theoneal@MacBook-Pro ~/opt/anaconda3/pkgs/suppa-2.3-py36_1/bin $ python3 suppa.py --help

I get

$ python3 suppa.py --help Traceback (most recent call last): File "/Users/theoneal/opt/anaconda3/pkgs/suppa-2.3-py36_1/bin/suppa.py", line 11, in import psiPerGene as psiPerIsoform File "/Users/theoneal/opt/anaconda3/pkgs/suppa-2.3-py36_1/bin/psiPerGene.py", line 14, in from lib.tools import * ModuleNotFoundError: No module named 'lib'

Any ideas?

Thanks Theo

[EduEyras]

Apologies for not responding earlier

Have you tried alternative ways of setting up SUPPA? It may be easier to simply download the current version of the code.

Thanks

Eduardo

On Thu, 15 Feb 2024 at 06:59, theokirkland @.***> wrote:

I am trying to run SUPPA on a mac. I have the program installed with conda. When I run the following command

@.*** ~/opt/anaconda3/pkgs/suppa-2.3-py36_1/bin $ python3 suppa.py --help

I get

$ python3 suppa.py --help Traceback (most recent call last): File "/Users/theoneal/opt/anaconda3/pkgs/suppa-2.3-py36_1/bin/suppa.py", line 11, in import psiPerGene as psiPerIsoform File "/Users/theoneal/opt/anaconda3/pkgs/suppa-2.3-py36_1/bin/psiPerGene.py", line 14, in from lib.tools import * ModuleNotFoundError: No module named 'lib'

Any ideas?

Thanks Theo

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