METEORE
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comprna
Automatic DNA methylation detection from nanopore tools and their consensus model
I'm going through the nanopolish part of the tutorial on WSL. It has mostly been running smoothly, generating the proper files etc. But the file output is different from the...
Hello, I can successfully run the nanopolish function on my sequencing data, but I am having trouble viewing the methylation in igv in order to produce some visual representation of...
Hi, While trying to run the Nanopolish snakemake with the example data I get the following error: RuleException: WorkflowError in line 25 of /METEORE/Nanopolish: HTTPError: HTTP Error 404: Not Found...
Hello, In E.coli Dcm methyltransferases methylate the C5 position of the second cytosine in the sequences CCAGG and CCTGG. I was wondering if I could use your tool for detecting...
Hi, Just wanted to see if it would be possible to update combination_model_train.py to include Chr. Also, I've tried to run it but got errors related to a Label field....
Hi, Awesome tool. However, when I use the pipeline to detect methylation with nanopolish, I found the memory consumption of split_cpg_groups.py is really huge. I believe it functions as a...
I am attempting to install METEORE and am running into libmamba and compatibility issues. I have tried installing from the mamba installation commands, as well as the .yml file. For...
