user_guide

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To be linked to from scatter section of novice tutorial

tobyhodges

I was asking on gitter for a guideline on when to provide functionality in a single tool wrapper and when to write multiple CommandLineTools. I have since found that the...

ttubb

advanced: extended discussion about linkMerge

2

See https://github.com/rabix/composer/issues/339

mr-c

document how to model a one-or-the-other parameter

5

From https://groups.google.com/d/msg/common-workflow-language/t7GEjKwJHys/2BvtkhsjXxMJ ``` > I'm not seeing how to model a boolean so that both 'true' and 'false' result > in differents strings being added to the command line. One...

mr-c

advanced file staging: writable inputs

1

either add to http://www.commonwl.org/user_guide/15-staging/ or create a new lesson

mr-c

Explain ScatterMethod

2

http://www.commonwl.org/v1.0/Workflow.html#ScatterMethod

mr-c

To better define the scope of the user guide and its sections, we should improve the wording of the learning objectives for each chapter. This can be done by selecting...

tobyhodges

I tried to use cwl and followed the [Common Workflow Language User Guide](http://www.commonwl.org/user_guide/),but I had questions. [In section 4(Returning Output Files)](http://www.commonwl.org/user_guide/04-output/index.html), `"example_out"` field is written as follows: ~~~ "example_out": {...

tsuchi8

Lesson 20 Use R instead of ips

1

https://scicrunch.org/scicrunch/Resources/record/nlx_144509-1/SCR_001905/resolver?q=r%20statistical&l= Lesson http://www.commonwl.org/user_guide/20-software-requirements/index.html

manabuishii

Test for the example in CI

6

It would be nice if there is a CI tester (such as Travis CI) for the examples in the user guide. Such a scheme can keep the examples runnable for...

tom-tan