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cds <- preprocess_cds(cds, num_dim = 100)

Open seekning opened this issue 8 months ago • 1 comments

please tell me what happed with this :i have reinstall Matrix package

cds <- preprocess_cds(cds, num_dim = 100) Error in (function (A, nv = 5, nu = nv, maxit = 1000, work = nv + 7, reorth = TRUE, : function 'as_cholmod_sparse' not provided by package 'Matrix'

seekning avatar Apr 04 '25 14:04 seekning

Hi,

The discussion in issue # 690 may help. You need to replace both the irlba and Matrix packages, I believe.

brgew avatar May 29 '25 19:05 brgew