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plot_genes_branched_pseudotime stretch pseudotime

Open heziqing opened this issue 3 years ago • 0 comments

Hi everyone, I used the plot_genes_branched_pseudotime function to plot some genes, the function default stretches each branch into maturation level 0-100. But it stretched the pseudotime from -6000 to 0 in the figure I got. when I set the stretch to FALSE, the pseudotime range from 0 to 25. How can I stretch the pseudotime from 0 to 100? The code I ran and the figures were below. Thanks in advance! `plot_genes_branched_pseudotime(cds_subset, branch_point = 1,color_by = "cell_anotation", ncol=5)

plot_genes_branched_pseudotime(cds_subset, branch_point = 1,color_by = "cell_anotation", ncol=5,stretch=FALSE)` image

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heziqing avatar Feb 09 '22 06:02 heziqing