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Issue about tree structure and distribution point of cells using different processed data by plot_cell_trajectory function

Open sunshine1126 opened this issue 3 years ago • 0 comments

Hi, thank you for this awesome tool! I noticed that the plot_cell_trajectory function using the different processed data, that is, the tree structure was shown using dp_mst generated from minSpanningTree but the distribution points of cells were displayed using data_df generated from t(monocle::reducedDimS(cds)) which was reduced dimension, which would eventually lead to inconsistent sequence and position of cells. I don't understand why? image image Can you help answer this question? Thanks again!

sunshine1126 avatar Nov 13 '21 15:11 sunshine1126