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cuffnorm says "Error: cuffdiff requires at least 2 SAM files"

Open yuifu opened this issue 8 years ago • 1 comments

When I run cuffnorm (v2.2.1 (4237)) on single CXB file, I received a error massage "Error: cuffdiff requires at least 2 SAM files".

I found the corresponding code in cuffnorm.cpp. cuffnorm.cpp

Can't I apply cuffnorm on single CXB file?

yuifu avatar Mar 03 '16 12:03 yuifu

When I run cuffnorm (v2.2.1 (4237)) on single CXB file, I received a error massage "Error: cuffdiff requires at least 2 SAM files".

I found the corresponding code in cuffnorm.cpp. cuffnorm.cpp

Can't I apply cuffnorm on single CXB file?

I have the same issue, I use this command to fix this bug

cuffnorm -no-update-check -p 20 -o $OUTDIR/cuffnorm -L S1_1, S1_2 genes.gtf S1/abundances.cxb S1/abundances.cxb

Landau1994 avatar Dec 31 '20 10:12 Landau1994