Tim Coalson
Tim Coalson
Should this also wait on PyPI releasing the package name?
1. I don't see the downside, manual installation would still work, right? 2. I don't have a strong objection, as our version numbering hasn't overlapped for a while. 3. I...
I really don't like whoever thought that deprecation should be a time-bomb. Deliberate backward incompatibility is not a useful feature, it just adds pain for the library's users. I don't...
I just released a 1.2.2 (after taking a bit of time to get bumpver working on an old python...), so hopefully that will resolve this.
Looks good to me, leaving it for a bit so others can look if they want.
`MASK` is currently a valid setting for a user-specified option, I think it should continue to be accepted, and do what it did previously. We can have `MASK` and `MASK_acpc`...
The current code looks like it uses `TXwFolder` without setting it in the `MASK_orig` case, so it shouldn't run properly, I assume you are still working on it. Normally, I...
My understanding is that the gradient distortion has no dependency on the head, but it is fixed in scanner space, rather than an aligned space. The warpfield output of gradunwarp...
However, if your slice plane is inclined with respect to the gradient axes, subvolume zeroing won't do what is desired. You'd need to do vector math with your slice plane...
> Right. This is precisely why you can't just compute the empirical transform between images (without regard to the location in the scanner) and assume that is providing a _generalizable_...