Colin Diesh

I think the issue with Firefox and IE not working, but Chrome working, is probably due to having this header (probably automatically by the webserver) enabled Content-Encoding: gzip If you...

Not sure I can reproduce this, e.g. it doesn't work for me at any point. If you accept canvasfeatures+bedtabix, then for me this seems like a nice workaround bgzip junctions.bed...

@childers I tried running a bin/flatfile-to-json on 1.16.5 on a simple junctions.bed file and I did not get subfeatures I don't have the apollo setup but I figured that it...

This was the junctions.bed I used ``` chr20 9353709 9360718 JUNC00000552 2 + 9353709 9360718 255,0,0 2 42,18 0,6991 chr20 9365023 9368124 JUNC00000553 1 + 9365023 9368124 255,0,0 2 35,15...

{   "label": "junctions",   "urlTemplate": "junctions.bed.gz", "storeClass": "JBrowse/Store/SeqFeature/BEDTabix" } More recent versions of jbrowse try to automatically guess storeClass based on file extension but for older jbrowse can manually supply it...

Might be a good reminder to document that if we are missing... Let me know if that helps though:)

Hmm...hard to tell what is going on there. Do you have a link to the instance? You are also saying that it works in 1.16-ish but not in 1.13-ish?

@mpoelchau sorry I forgot something in the track config...have to specify both type and storeClass...the newer jbrowse versions automatically infers both but in older versions specifying both is needed ```...

@mpoelchau looks like only later versions of jbrowse add subfeature parsing of bedtabix. if needed in 1.12.5, could make a subclass of BEDTabix in a plugin that does the subfeature...

Not really, it's mostly organizational that is based on pointing to a remote jbrowse instance that cooperates. If it is based strictly on pointing the electron instance using the "?data=http://remote_instance/"...