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merge.gct error

Open oena opened this issue 6 years ago • 0 comments

even when matrix_only = T, merge.gct will add metadata of one GCT object to output. Can be fixed by setting cdesc to an empty dataframe as follows, but shouldn't be occurring in the first place:

overlap_tsne_modz <- merge.gct(merge.gct(xpr_b_for_tsne, xpr_lm_for_tsne, dimension = "column", matrix_only = T), xpr_c_for_tsne, dimension = "column", matrix_only = T) overlap_tsne_modz@cdesc <- data.frame(id=overlap_tsne_modz@cid) overlap_tsne_modz <- annotate.gct(overlap_tsne_modz, overlap_sigs, dimension="column", keyfield = "sig_id")

oena avatar Feb 15 '19 20:02 oena