Welcome to the BIOS512 repository!

Notebook:

Lab:

NBViewer:

SageMaker Studio Lab:

Link to Glossary

This course will teach you the skills to build and communicate end-to-end data narratives.

We will specifically be focusing on the following techology:

• Tidyverse
• Jupyter
• Docker
• Git and GitHub
• (if time permits...) TidyModels

Asking questions

Please use the course Slack to ask questions.

Syllabus

You can find the course syllabus here: syllabus

Lectures

Exploratory data analysis and and visualization

• lecture 01
  • introduction
• lecture 02
  • Jupyter Notebooks
  • GitHub/Slack
• lecture 03
  • beginning GitHub
  • markdown
• lecture 04
  • beginning GGPlot2
  • review GGPlot2
  • multiple plots
• lecture 05
  • a tour of geoms
  • distributions
  • ECDF plots
• lecture 06
  • adjusting plot appearance
• lecture 07
  • GGPlot2 themes
  • GGPlot2 review and advanced usage

Data wrangling and preparation

• lecture 08
  • dplyR introduction
• lecture 09
  • more dplyR
  • data import/export
  • spreadsheets
  • file formats
• lecture 10
  • dataframes and tibbles
  • introducing functions
• lecture 11
  • factors
• lecture 12
  • re-shaping
• lecture 13
  • data joins
  • Python example
  • review
• lecture 14
  • Plotly introduction
  • Dockerfiles
• lecture 15
  • Plotly review
  • Docker use example
  • pivots