Error in order(pANN$pANN[1:n_real.cells], decreasing = TRUE)[1:nExp] :

[wangpenhok]

``

sessionInfo() R version 4.4.0 (2024-04-24) Platform: x86_64-pc-linux-gnu Running under: Ubuntu 20.04.6 LTS Matrix products: default BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0 LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0 locale: [1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8 LC_MONETARY=en_US.UTF-8
[6] LC_MESSAGES=en_US.UTF-8 LC_PAPER=en_US.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
time zone: Asia/Shanghai tzcode source: system (glibc) attached base packages: [1] parallel stats graphics grDevices utils datasets methods base
other attached packages: [1] ROCR_1.0-11 KernSmooth_2.23-22 fields_15.2 viridisLite_0.4.2 spam_2.10-0 DoubletFinder_2.0.4 stringr_1.5.1 [8] reticulate_1.36.1 scCustomize_2.1.2 SeuratDisk_0.0.0.9021 Matrix_1.7-0 hdf5r_1.3.10 ggplot2_3.5.1 patchwork_1.2.0 [15] Seurat_5.1.0 SeuratObject_5.0.2 sp_2.1-4 dplyr_1.1.4 loaded via a namespace (and not attached): [1] RcppAnnoy_0.0.22 splines_4.4.0 later_1.3.2 R.oo_1.26.0 tibble_3.2.1 cellranger_1.1.0
[7] polyclip_1.10-6 janitor_2.2.0 fastDummies_1.7.3 lifecycle_1.0.4 globals_0.16.3 processx_3.8.4
[13] lattice_0.22-6 MASS_7.3-60.2 magrittr_2.0.3 plotly_4.10.4 rmarkdown_2.26 yaml_2.3.8
[19] remotes_2.5.0 httpuv_1.6.15 sctransform_0.4.1 sessioninfo_1.2.2 pkgbuild_1.4.4 spatstat.sparse_3.0-3 [25] cowplot_1.1.3 pbapply_1.7-2 RColorBrewer_1.1-3 lubridate_1.9.3 maps_3.4.2 abind_1.4-5
[31] pkgload_1.3.4 Rtsne_0.17 R.utils_2.12.3 purrr_1.0.2 circlize_0.4.16 ggrepel_0.9.5
[37] irlba_2.3.5.1 listenv_0.9.1 spatstat.utils_3.0-4 goftest_1.2-3 RSpectra_0.16-1 spatstat.random_3.2-3 [43] fitdistrplus_1.1-11 parallelly_1.37.1 leiden_0.4.3.1 codetools_0.2-20 tidyselect_1.2.1 shape_1.4.6.1
[49] farver_2.1.1 matrixStats_1.3.0 spatstat.explore_3.2-7 jsonlite_1.8.8 ellipsis_0.3.2 progressr_0.14.0
[55] ggridges_0.5.6 survival_3.6-4 tools_4.4.0 ica_1.0-3 Rcpp_1.0.12 glue_1.7.0
[61] gridExtra_2.3 xfun_0.43 usethis_2.2.3 withr_3.0.0 BiocManager_1.30.23 fastmap_1.1.1
[67] fansi_1.0.6 callr_3.7.6 digest_0.6.35 timechange_0.3.0 R6_2.5.1 mime_0.12
[73] ggprism_1.0.5 colorspace_2.1-0 scattermore_1.2 tensor_1.5 spatstat.data_3.0-4 anndata_0.7.5.6
[79] R.methodsS3_1.8.2 utf8_1.2.4 tidyr_1.3.1 generics_0.1.3 data.table_1.15.4 httr_1.4.7
[85] htmlwidgets_1.6.4 uwot_0.2.2 pkgconfig_2.0.3 gtable_0.3.5 lmtest_0.9-40 htmltools_0.5.8.1
[91] profvis_0.3.8 dotCall64_1.1-1 scales_1.3.0 png_0.1-8 snakecase_0.11.1 knitr_1.46
[97] rstudioapi_0.16.0 reshape2_1.4.4 nlme_3.1-164 curl_5.2.1 cachem_1.0.8 zoo_1.8-12
[103] GlobalOptions_0.1.2 miniUI_0.1.1.1 vipor_0.4.7 ggrastr_1.0.2 desc_1.4.3 pillar_1.9.0
[109] grid_4.4.0 vctrs_0.6.5 RANN_2.6.1 urlchecker_1.0.1 promises_1.3.0 xtable_1.8-4
[115] cluster_2.1.6 paletteer_1.6.0 beeswarm_0.4.0 evaluate_0.23 cli_3.6.2 compiler_4.4.0
[121] rlang_1.1.3 crayon_1.5.2 future.apply_1.11.2 labeling_0.4.3 rematch2_2.1.2 ps_1.7.6
[127] plyr_1.8.9 forcats_1.0.0 fs_1.6.4 ggbeeswarm_0.7.2 stringi_1.8.4 deldir_2.0-4
[133] assertthat_0.2.1 munsell_0.5.1 lazyeval_0.2.2 devtools_2.4.5 spatstat.geom_3.2-9 RcppHNSW_0.6.0
[139] bit64_4.0.5 future_1.33.2 shiny_1.8.1.1 igraph_2.0.3 memoise_2.0.1 bit_4.0.5
[145] readxl_1.4.3 ``