Chris Grove

Updating ticket: Updating title to "abnormallyIncreasedRateOfBehavior" Pattern GitHub location as of May 9, 2019: https://github.com/obophenotype/upheno/blob/master/src/patterns/dosdp-dev/abnormallyIncreasedRateOfBehavior.yaml Pattern IRI as of May 9, 2019: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyIncreasedRateOfBehavior.yaml Pattern as of May 9, 2019: ```...

Thanks. FYI, my handle is @chris-grove not the one above (just so we don't spam that other person) ;)

@matentzn Here's my initial assessment: ``` Expected subsumptions missing: 1. abnormalAbsenceOfChemicalEntityInLocation.yaml SubClassOf abnormallyDecreasedLevelOfChemicalEntityInLocation.yaml 2. abnormalAbsenceOfChemicalEntity.yaml SubClassOf abnormallyDecreasedLevelOfChemicalEntity.yaml 3. abnormalShapeOfAnatomicalEntityByShapeType.yaml SubClassOf abnormalAnatomicalEntity.yaml (related to #11) 4. abnormalBehavior.yaml SubClassOf abnormalBiologicalProcess.yaml 5. abnormallyDecreasedRateOfBiologicalProcess.yaml...

As with my comment for https://github.com/obophenotype/upheno/issues/419 I would request that the name and definition change to "Abnormally increased rate of %s" or simply "increased rate of %s"

Updating ticket: Updating title to "abnormallyIncreasedRateOfBiologicalProcess" Pattern GitHub location as of May 9, 2019: https://github.com/obophenotype/upheno/blob/master/src/patterns/dosdp-dev/abnormallyIncreasedRateOfBiologicalProcess.yaml Pattern IRI as of May 9, 2019: http://purl.obolibrary.org/obo/upheno/patterns-dev/abnormallyIncreasedRateOfBiologicalProcess.yaml Pattern as of May 9, 2019: ```...

At WormBase, we would curate similar "normal" cases just as annotations to "sterile" and "lethal" with a "NOT" qualifier to indicate NOT sterile and NOT lethal (a.k.a. "fertile" and "viable")....