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Published 20 hours ago • verified publisher icon chrchang

--clump in plink2

Open Shicheng-Guo opened this issue 3 years ago • 1 comments

hope --clump is implemented in plink2

Shicheng-Guo avatar Oct 09 '21 19:10 Shicheng-Guo

It will be implemented... but not before generic merge and --r2 are working, so not that soon. In the meantime, plink 1.9 --clump has been retrofitted to be usable on plink2 --glm output.

chrchang avatar Oct 11 '21 18:10 chrchang

This is now implemented. It ended up moving ahead of merge and --r2 after all, partly because I realized that plink 1.9 --clump did not filter on the TEST column of --linear/--logistic/--glm.

chrchang avatar Oct 16 '23 21:10 chrchang