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Published 20 hours ago • verified publisher icon chrchang

--check-sex is depleted in Plink2.0?

Open SiyangLiu opened this issue 5 years ago • 1 comments

Hi Chang, It seems that PLINK 2.0 depleted the function for checking sex using inbreeding coefficient. Is there any way in PLINK 2.0 to impute sex from the genotypes? PLINK v2.00a2LM 64-bit Intel (10 Nov 2019) www.cog-genomics.org/plink/2.0/ (C) 2005-2019 Shaun Purcell, Christopher Chang GNU General Public License v3

Best, Siyang

SiyangLiu avatar Nov 11 '19 08:11 SiyangLiu

For now, export a .bed and use plink 1.9 for this.

chrchang avatar Nov 11 '19 15:11 chrchang