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Published 20 hours ago • verified publisher icon chrchang

--clump

Open jinghuazhao opened this issue 5 years ago • 1 comments

I am wondering it would be very useful to add a log10(p)-like option to --clump-p which would save some effort to prepare for a P column when it is very small but log10(P) is manageable, e.g., LOGPVALUE ON of METAL would give such outputs. Already PLINK takes on .gz file which is a nice feature.

At the moment a specification such as --clump-p1 -9.3 are considered two options.

jinghuazhao avatar Jul 12 '19 08:07 jinghuazhao

Something along these lines will be supported by the plink 2.0 --clump implementation, but that's still some time away (merge is a higher priority...).

chrchang avatar Oct 06 '19 16:10 chrchang

This is now implemented.

chrchang avatar Oct 16 '23 21:10 chrchang