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Plotting PRSice results

Open oalavijeh opened this issue 1 year ago • 0 comments

I have a binary trait and have generated a PRSice file.

I would like to plot this but work on a HPC environment where plotting doesn't really work.

I have tried following the code from here: https://choishingwan.github.io/PRS-Tutorial/plink_visual/ to turn the PRSice.summary score into a bar plot but I think because I haven't binned the P-values into slot the plot is supercongested (See screenshot).

How would I convert a PRSice.summary score into the "prs.result" file that would be needed to plot from your tutorial?

Many thanks

image

oalavijeh avatar Oct 10 '22 13:10 oalavijeh