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Update platereader.py, incorporating good parts of xml2png.py, then use in xml2png

Open sonyahanson opened this issue 10 years ago • 2 comments

Update platereader.py, incorporating good parts ofxml2png.py and good parts of current platereader.py:

  • Make a constructor with toDataframe(), getWellData(), getColumn(), and getRow()).
  • In the process find out whether dataframe or dictionary underneath is easiest for now, and will also see if there's a convenient way to attach the read parameters to the actual data.
  • Then use this in new xml2png and ipynbs.

sonyahanson avatar Jan 14 '16 00:01 sonyahanson

Among the things xml2png can do that should be incorporated in new platereader.py:

  • Be able to tolerate xml data with 'OVER's
  • Be able to deal with spectra and scans

sonyahanson avatar Jan 14 '16 16:01 sonyahanson

What value should OVER be converted to? NaN or Inf maybe?

jchodera avatar Jan 14 '16 16:01 jchodera