Duplicated BUSCO for polyploid genome

[Phytoecia]

Hello,

I am using hifiasm to perform hifi-only assembly of a allopolyploid species. While the basic metrics are good (high N50, Complete BUSCO>98%), I got only 57% of Duplicated BUSCO. I suspected the homoelogues have been merged at some point in our run. In the Hifiasm paper, the strawberry genome showed very high Duicated BUSCO, which we desire. What can we try more?

Best, Minsoo