hifiasm
hifiasm copied to clipboard
Information of All-versus-all pairwise alignment
Dear Hifiasm community and developers,
This is a very important piece of software. Now I'm having some problems.
How can I obtain information on All-versus-all pairwise alignment to view the overlapping areas between reads and the coverage information of such areas. Hifiasm seems to have used this information when correcting reads. How can I extract this information? I want to look at some of the repetitive regions of the genome.